Since you are getting a blue screen error, that tells you that it is (probably) not a problem with the boot sector. The boot sector is being read and the kernel is being started. What it's choking on is that it cannot find the RAID controller in the same place that it was when you installed Windows. This could be because you replaced the RAID controller with a slightly different one (wrong driver) or even something as stupid as it being the same type of card but in a different slot (different IRQ).
Your best bet is probably to do a repair booting off Windows install CD as Steve said. Then you Windows will re-learn everything it needs to about that controller.
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Today's Featured Article - Box Plow Blues - by Tom Schwarz. One of the first implements most tractor owners obtain is the box plow. For very little money, this piece of equipment promises to plow and flatten any hill or vale on your ranch road or farm. At least that's what I thought! As simple as a box plow appears, it can be rather challenging to make work correctly. In our sandy soils of Florida, traction is king. You can never have wide enough tires or heavy enough weights to get all the traction you want … unless you own a monster tractor. U
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